Publications in Analysis of Genomic Data

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        Last updated on 11/21/2008

Hunter MP, Ismail N, Zhang X, Aguda BD, Lee EJ, Yu L, Xiao T, Schafer J, Lee M-LT, Schmittgen TD, Nana-Sinkam SP, Jarjoura D, Marsh C. Detection of microRNA Expression in Human Peripheral Blood Microvesicles, PLoS ONE, 2008, Vol. 3: 11, e3694

Zhang Y, Bertolino A, Fazio L, Blasi G, Rampino A, Romano R, Lee M-LT, Xiao T, Papp A, Wang D, and Sad¨¦e W. Novel polymorphisms in the human dopamine D2 receptor gene affect gene expression, splicing, and neuronal activity during working memory, Proceedings of the National Academy of Sciences, USA, 2007, 104: 20552-20557.

Qiu W, Lee M-LT. SPCalc: A web-based calculator for sample size and power calculations in micro-array studies, Bioinformation, 2006, 1: 251-252.

Qin S, Qiu W, Ehrlich JR, Ferdinand AS, Richie JP, O’Leary MP, Lee M-LT, Liu BC-S. Development of a reverse capture autoantibody microarray for studies of antigen-autoantibody profiling. Proteomics, 2006, 6: 3199-3209 .

Lee M-LT, Whitmore GA, Bjorkbacka H, Freeman M. Nonparametric Methods for Microarray Data Based on Exchangeability and Borrowed Power. Journal of Biopharmaceutical Statistics, 2005, 15: 783-797 .

Tsai PW, LEE M-LT. Split-plot microarray experiments: issues of design, power and sample size. Applied Bioinformatics, 2005, 4: 187-194.

LEE M-LT, Gray RJ, Bjorkbacka H, Freeman MW. Generalized Rank Tests for Replicated Microarray Data. Statistical Applications in Genetics and Molecular Biology, 2005, Vol. 4: No. 1, Article 3.

Lee M-LT, Whitmore GA. Intensity-dependent normalization in microarray analysis: a note of concern. Bernoulli, 2004, 10: 943-949.

Lee M-LT, Whitmore GA, Yukhananov RY. Analysis of unbalanced microarray data, Journal of Data Science, 2003; 1: 103-121.

Lee M-LT, Whitmore GA. Power and sample size for microarray studies, Statistics in Medicine, 2002; 21: 3543-3570.

Lee M-LT, Bulyk ML, Whitmore GA, Church GM. A statistical model for investigating binding probability of DNA nucleotide sequences using microarrays, Biometrics, 2002; 58: 981-988.

Lee M-LT, Lu W, Whitmore GA, Beier D. Models for microarray gene expression data, Journal of Biopharmaceutical Statistics, 2002; 12: 1-19.

Lee M-LT, Kuo FC, Whitmore GA, Sklar J. Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridization. Proceedings of the National Academy of Sciences, 2000; 97: 9834-9839.